Table 1. Origins of isolates of Cryptococcus neoformans and C. bacillisporus
studied
(see also www.knaw.nl/publications/online/hybrids_Cryptococcus_neoformans)
|
Strain
|
AFLP
geno-
type
|
Sero-
type
|
Origin
|
Location
|
|
C. neoformans
|
|
|
|
|
|
CBS132
|
3
|
D
|
Fermenting fruit juice, T Cryptococcus neoformans
|
Italy
|
|
CBS464
|
3
|
A*
|
Unknown
|
France
|
|
CBS879
|
1
|
A
|
Ulcerated cheek
|
Unknown
|
|
CBS882
|
2
|
D
|
Nasal tumor of horse, T Torula nasalis Harrison
|
USA
|
|
CBS886
|
1
|
A
|
Unknown
|
Unknown
|
|
CBS887
|
1
|
A
|
Unknown
|
Unknown
|
|
CBS888
|
2
|
D
|
Unknown
|
Unknown
|
|
CBS889
|
1
|
A*
|
Unknown
|
Unknown
|
|
CBS916
|
1
|
A
|
Unknown
|
Unknown
|
|
CBS918
|
2
|
D
|
Dead white mouse
|
The Netherlands
|
|
CBS939
|
3
|
D*
|
Unknown
|
Unknown
|
|
CBS950
|
3
|
AD*
|
Tumour
|
Unknown
|
|
CBS996
|
1
|
A
|
Blastomycosis from man, T Candida psicrophylicus
|
Argentina
|
|
CBS1144
|
1
|
A
|
CSF
|
Unknown
|
|
CBS1931
|
1
|
A
|
Soil
|
Unknown
|
|
CBS1932
|
1A
|
A
|
Soil
|
Unknown
|
|
CBS1935
|
1
|
A
|
Soil
|
Unknown
|
|
CBS2771
|
1
|
A
|
CSF
|
Unknown
|
|
CBS4194
|
2
|
D
|
Spleen
|
Germany
|
|
CBS5467
|
2
|
D
|
Milk from mastitic cow
|
Switzerland
|
|
CBS5474
|
2
|
D
|
Mastitic cow
|
Unknown
|
|
CBS5728
|
2
|
D
|
Non-meningitic cellulitis
|
USA
|
|
CBS5756
|
1
|
A
|
Unknown
|
Unknown
|
|
CBS6885 (NIH 12)
|
2
|
D
|
Lesion on bone in man, T Filobasidiella neoformans
|
USA
|
|
CBS6886 (NIH 430)
|
2
|
D
|
Pigeon droppings
|
Denmark
|
|
CBS6900 (NIH B-3501)
|
2
|
D
|
Genetic offspring of CBS 6885 x 6886
|
|
|
CBS6901 (NIH B-3502)
|
2
|
D
|
Genetic offspring of CBS 6885 x 6886
|
|
|
CBS6961
|
1
|
A*
|
Man
|
USA
|
|
CBS6995
|
2
|
D*
|
CSF non AIDS patient
|
USA
|
|
CBS6999
|
1
|
A
|
Pigeon droppings
|
Thailand
|
|
CBS7000
|
2
|
D
|
Pigeon droppings
|
Denmark
|
|
CBS7779
|
1
|
A
|
AIDS patient, urease negative
|
Argentina
|
|
CBS7812
|
1
|
A
|
CSF non AIDS patient
|
Unknown
|
|
CBS7814
|
2
|
D*
|
Air
|
Belgium
|
|
CBS7815
|
2
|
D
|
Pigeon droppings
|
Former Czechoslovakia
|
|
CBS7816
|
2
|
D*
|
Cookoo droppings
|
Thailand
|
|
CBS7821
|
3
|
AD
|
Single basidiospore 6886 x 7814 (ATCC 42161)
|
|
|
CBS7822
|
2
|
D*
|
Single basidiospore 6885 x 6886
|
|
|
CBS7824
|
?
|
D*
|
Single basidiospore 7816
|
|
|
CBS7825
|
?
|
AD
|
Single basidiospore 7816 self
|
|
|
CBS8336
|
1
|
A
|
Decaying wood of Cassia tree
|
Brazil
|
|
CBS8337
|
1
|
A
|
Decaying wood of Cassia tree
|
Brazil
|
|
CBS8710
|
1
|
A
|
Hodgkin's disease, T Cryptococcus neoformans var. grubii
|
USA
|
|
Hamdan214-L
|
1A
|
A
|
AIDS patient
|
Brazil
|
|
Hamdan 299
|
1A
|
A
|
AIDS patient
|
Brazil
|
|
Hamdan 822b
|
1
|
A
|
AIDS patient
|
Brazil
|
|
Hamdan C3-1
|
1A
|
A
|
Pigeon droppings
|
Brazil
|
|
Hamdan C31
|
1A
|
A
|
AIDS patient
|
Brazil
|
|
Hamdan F2'1
|
1
|
A
|
Pigeon droppings
|
Brazil
|
|
Hamdan I3'1
|
1
|
A
|
Pigeon droppings
|
Brazil
|
|
Hamdan MCP-2
|
1A
|
A
|
Pigeon droppings
|
Brazil
|
|
Hamdan WP
|
1
|
A
|
AIDS patient
|
Brazil
|
|
J10
|
1
|
A
|
AIDS patient
|
USA
|
|
J11
|
1A
|
A
|
AIDS patient
|
USA
|
|
J15
|
1
|
A
|
AIDS patient
|
USA
|
|
J22a
|
3
|
D
|
AIDS patient
|
USA
|
|
J40
|
3
|
D
|
AIDS patient
|
USA
|
|
J51
|
1
|
A
|
AIDS patient
|
USA
|
|
J9
|
2
|
D*
|
AIDS patient
|
USA
|
|
NIH192
|
1
|
A
|
Desert soil
|
USA
|
|
NIH193
|
1
|
A
|
Soil
|
USA
|
|
NIH296
|
1
|
A
|
Non AIDS patient
|
USA
|
|
NIH311
|
1
|
A
|
Non AIDS patient
|
USA
|
|
NIH443
|
1
|
A
|
Soil
|
USA
|
|
NIH449
|
1
|
A
|
Non AIDS patient
|
USA
|
|
P050
|
1
|
A
|
AIDS patient
|
Zimbabwe
|
|
P056
|
1
|
A
|
AIDS patient
|
Zimbabwe
|
|
P090
|
1
|
A
|
AIDS patient
|
Zimbabwe
|
|
P139
|
1
|
A
|
AIDS patient
|
Zimbabwe
|
|
P140
|
1
|
A
|
AIDS patient
|
Zimbabwe
|
|
P141
|
1
|
A
|
AIDS patient
|
Zimbabwe
|
|
P152
|
1
|
A
|
AIDS patient
|
Zimbabwe
|
|
P172
|
1
|
A
|
AIDS patient
|
Zimbabwe
|
|
RV26952
|
1
|
A
|
CSF, non AIDS patient
|
Zaire
|
|
RV46115
|
1
|
A
|
Plants
|
India
|
|
RV46119
|
1
|
A
|
Pigeon droppings
|
India
|
|
RV46129
|
1
|
A
|
Pigeon droppings
|
India
|
|
RV52733
|
3
|
D
|
Pigeon droppings
|
Belgium
|
|
RV52755
|
3
|
D*
|
CSF, non AIDS patient
|
Belgium
|
|
RV53794
|
3
|
D
|
Canary droppings
|
Belgium
|
|
RV55446
|
1
|
A
|
House dust
|
Zaire
|
|
RV55451
|
1
|
A
|
Cockroach
|
Zaire
|
|
RV55980
|
1
|
A
|
Canary droppings
|
Belgium
|
|
RV56126
|
1A
|
A
|
CSF, AIDS patient
|
Belgium (visited Haiti)
|
|
RV56883
|
1
|
A
|
Canary droppings
|
Belgium
|
|
RV56894
|
1
|
A
|
Canary droppings
|
Belgium
|
|
RV58145
|
1
|
A
|
Wood
|
Zaire
|
|
RV58146
|
1A
|
A
|
Wood
|
Zaire
|
|
RV59351
|
1
|
A
|
Parrot droppings
|
Belgium
|
|
RV59369
|
1
|
A
|
Parrot droppings
|
Belgium
|
|
RV59379
|
1
|
A
|
Air in zoo
|
Belgium
|
|
RV60074
|
1
|
A*
|
Skin cryptococcosis, non AIDS patient
|
Belgium
|
|
RV61756
|
1A
|
AD
|
Man
|
Belgium (visited Zaire)
|
|
RV61790
|
1
|
A
|
Man
|
Belgium
|
|
RV62210
|
1
|
A
|
CSF, AIDS patient
|
Belgium
|
|
RV62692
|
2
|
D
|
Skin cryptococcosis
|
Belgium
|
|
RV63214
|
1
|
A
|
CSF, AIDS patient
|
Zaire
|
|
RV63642
|
1
|
A
|
CSF, AIDS patient
|
Brazil
|
|
RV64610
|
1A
|
A
|
AIDS patient
|
Rwanda
|
|
RV64612
|
1
|
A
|
AIDS patient
|
Rwanda
|
|
RV65361
|
1
|
A
|
CSF, probably AIDS patient
|
Zaire
|
|
RV65662
|
1A
|
A
|
AIDS patient
|
Portugal
|
|
RV66025
|
1
|
A
|
Cryptococcoma, non AIDS patient
|
Belgium
|
|
RV66055
|
1
|
A
|
AIDS patient
|
Rwanda
|
|
WM164
|
1A
|
A
|
Pigeon droppings
|
Australia
|
|
WM361
|
1
|
A
|
CSF AIDS patient
|
Thailand
|
|
WM364
|
1
|
A
|
CSF AIDS patient
|
Thailand
|
|
WM374
|
1
|
A
|
CSF AIDS patient
|
Thailand
|
|
WM375
|
1
|
A
|
CSF AIDS patient
|
Thailand
|
|
WM553
|
1A
|
A
|
Dust from house
|
Brazil
|
|
WM554
|
1
|
A
|
Dust from pigeons
|
Brazil
|
|
WM555
|
1
|
A
|
Dust from pigeon
|
Brazil
|
|
WM712
|
1
|
A
|
Cat paranasal
|
Australia
|
|
WM713
|
1
|
A
|
Cat paranasal
|
Australia
|
|
WM714
|
1
|
A
|
Cat paranasal
|
Australia
|
|
WM715
|
1
|
A
|
Pine needles
|
Australia
|
|
WM716
|
1
|
A
|
Woody debris of Eucalyptus camaldulensis
|
Australia
|
|
WM719
|
1
|
A
|
AIDS patient
|
South Africa
|
|
WM720
|
1
|
A
|
Pigeon droppings
|
India
|
|
WM721
|
1
|
A
|
Pigeon droppings
|
India
|
|
WM722
|
1
|
A
|
Pigeon droppings
|
India
|
|
WM723
|
1
|
A
|
Environmental isolate
|
USA
|
|
WM724
|
1
|
A
|
Debris of Eucalyptus
|
USA
|
|
WM725
|
1
|
A
|
Debris zoo hippo cage
|
USA
|
|
110B
|
1
|
A
|
Environmental isolate
|
France
|
|
122A
|
1
|
A
|
Environmental isolate
|
France
|
|
12A
|
1
|
A
|
Environmental isolate
|
France
|
|
13A
|
1
|
A
|
Environmental isolate
|
France
|
|
20B
|
2
|
D
|
Environmental isolate
|
France
|
|
22A
|
2
|
D
|
Environmental isolate
|
France
|
|
385D
|
2
|
D
|
Unknown
|
USA ?
|
|
57B
|
1
|
A
|
Environmental isolate
|
France
|
|
RDA 1335 AvB0
|
1
|
A
|
AIDS patientno. 1
|
The Netherlands
|
|
RDA 1340 AvB1
|
1
|
A
|
AIDS patientno.1
|
The Netherlands
|
|
RDA 4092 AvB10
|
1
|
A
|
AIDS patientno. 9
|
The Netherlands
|
|
RDA 4094 AvB11
|
1
|
A
|
AIDS patientno.10
|
The Netherlands
|
|
RDA 4054 AvB12
|
1
|
A
|
AIDS patientno.11
|
The Netherlands
|
|
RDA 4091 AvB13
|
1
|
A
|
AIDS patientno.12
|
The Netherlands
|
|
RDA 1371 AvB2
|
1
|
A
|
AIDS patientno. 2
|
The Netherlands
|
|
RDA 1369 AvB3
|
1
|
A
|
AIDS patientno. 3
|
The Netherlands
|
|
RDA 1373 AvB4
|
1
|
A
|
AIDS patientno. 3
|
The Netherlands
|
|
RDA 1549 AvB7
|
1
|
A
|
AIDS patientno. 6
|
The Netherlands
|
|
B10
|
1
|
A
|
Environmental isolate
|
USA
|
|
B3
|
1
|
A
|
Environmental isolate
|
USA
|
|
B5
|
1
|
A
|
Environmental isolate
|
USA
|
|
BA1
|
3
|
D*
|
AIDS patient
|
France
|
|
BA3
|
3
|
AD*
|
AIDS patient
|
France
|
|
BA4
|
3
|
AD*
|
AIDS patient
|
France
|
|
BA5
|
3
|
AD*
|
AIDS patient
|
France
|
|
BD1
|
2
|
D
|
AIDS patient
|
France
|
|
BD2
|
1
|
A
|
AIDS patient
|
France
|
|
BD3
|
2
|
D
|
AIDS patient
|
France
|
|
BD5
|
2
|
D
|
AIDS patient
|
France
|
|
C. bacillisporus
|
|
|
|
|
|
CBS883
|
4B
|
B
|
Infected skin, syntype C.hondurianus
|
Honduras
|
|
CBS919
|
4A
|
B
|
Meningoencephalic lesion, T Torulopsis neoformans var. sheppei
|
USA
|
|
CBS1622
|
4A
|
B
|
Tumor
|
Unknown
|
|
CBS1930
|
6
|
B
|
Sick goat
|
Aruba
|
|
CBS1934
|
4A
|
B
|
Mastitic cow
|
USA
|
|
CBS5757
|
4A
|
B
|
Unknown
|
Unknown
|
|
CBS5758
|
5C
|
C
|
Unknown
|
Unknown
|
|
CBS6289
|
4A
|
B
|
Subculture of type strain RV20186
|
Zaire
|
|
CBS6290
|
4A
|
B
|
Man
|
Republic of Congo
|
|
CBS6955 (NIH 191)
|
5C
|
C
|
CSF, T Filobasidiella bacillispora
|
USA
|
|
CBS6956 (NIH 444)
|
6
|
B
|
Sputum
|
USA
|
|
CBS6992 (NIH 17)
|
4A
|
B
|
Man
|
USA
|
|
CBS6993 (NIH 18)
|
5C
|
C
|
Man
|
USA
|
|
CBS6994 (NIH 34)
|
5C
|
C
|
CSF
|
USA
|
|
CBS6997 (NIH 298)
|
5C
|
B
|
CSF
|
USA
|
|
CBS7229
|
4B
|
B
|
Meningitis,T C. neoformans var. shanghaiensis
|
China
|
|
CBS7523
|
4B
|
B
|
Eucalyptus camaldulensis
|
Australia
|
|
CBS7740
|
4B
|
B
|
CSF
|
India
|
|
CBS7742
|
4B
|
B
|
CSF
|
India
|
|
CBS7747
|
4B
|
B
|
Seedling of olive
|
Australia
|
|
CBS7748
|
4B
|
B
|
Air in hollow Eucalyptus camaldulensis
|
Australia
|
|
CBS7749
|
4B
|
B
|
Bark debris of Eucalyptus camaldulensis
|
Australia
|
|
CBS7750
|
6
|
B
|
Bark debris of Eucalyptus camaldulensis
|
USA
|
|
CBS8684
|
6
|
B
|
Nest of wasp
|
Uruguay
|
|
CBS8755 (HOO58-I-682)
|
5A
|
C
|
Detritus of Almond tree
|
Colombia
|
|
CBS8756 (HOO58-I-818)
|
5A
|
C
|
Detritus of Almond tree
|
Colombia
|
|
CDC B-5751
|
4B
|
B
|
CSF, non AIDS patient
|
India
|
|
CDC5765
|
4B
|
B
|
Flowers of Eucalyptus camaldulensis
|
India
|
|
NIH139
|
5C
|
C
|
Non AIDS patient
|
USA
|
|
NIH178
|
5C
|
C
|
Non AIDS patient
|
USA
|
|
NIH189
|
5B
|
B
|
Non AIDS patient
|
USA
|
|
NIH190
|
5B
|
B
|
Non AIDS patient
|
USA
|
|
RV20186
|
4A
|
B
|
CSF
|
Zaire
|
|
RV5265
|
4A
|
B
|
CSF
|
Zaire
|
|
RV54130
|
4B
|
B
|
Second isolate of C.neoformans var. shanghaiensis
|
China
|
|
RV66095
|
4A
|
B
|
CSF non AIDS patient
|
Brazil
|
|
WM161
|
5B
|
B
|
Debris of Eucalyptus spp.
|
USA
|
|
WM176
|
4B
|
B
|
Eucalyptus citriodora
|
USA
|
|
WM717
|
4B
|
B
|
Woody debris of Eucalyptus tericornis
|
USA
|
|
WM718
|
4B
|
B
|
Woody debris of Eucalyptus tericornis
|
USA
|
|
WM726
|
5B
|
B
|
Eucalyptus citriodora
|
USA
|
|
WM727
|
4A
|
B
|
Debris of Eucalyptus from car park of zoo
|
USA
|
|
WM728
|
5B
|
B
|
Debris of Eucalyptus from car park of zoo
|
USA
|
|
380C
|
5C
|
C
|
Unknown
|
Unknown
|
|
381C
|
5C
|
C
|
Unknown
|
USA
|
|
384C
|
5C
|
C
|
Patient
|
USA
|
|
385C (= NIH 18)
|
5B
|
C
|
Unknown
|
USA
|
|
48A
|
4A
|
B
|
Lung of a goat
|
Spain
|
|
52A
|
4A
|
B
|
Brain of a goat
|
Spain
|
|
55A
|
4A
|
B
|
Lung of a goat
|
Spain
|
|
56A
|
4A
|
B
|
Gut of a goat
|
Spain
|
|
59A
|
4A
|
B
|
Lung of a goat
|
Spain
|
|
60A
|
4A
|
B
|
Lung of a goat
|
Spain
|